Sam_g08482


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08482

Target Alias Description ECC score Gene Family Method Actions
Als_g17869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G005900.1 Ceric.38G005900 not classified & original description: pacid=50579413... 0.03 OrthoFinder output from all 47 species
Dde_g12833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037449001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g20530.1 LOC_Os03g20530 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48690.1 LOC_Os07g48690 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g15336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007453 No alias not classified & original description: CDS=206-1297 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026102 No alias not classified & original description: CDS=1-2688 0.03 OrthoFinder output from all 47 species
Solyc03g120140.3.1 Solyc03g120140 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g007100.3.1 Solyc09g007100 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020548_P001 Zm00001e020548 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033110_P001 Zm00001e033110 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 330 619
IPR006868 DUF630 1 63
No external refs found!