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  5. Sam_g08324

Sam_g08324


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0003540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08324
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00224260 EMB1691,... RNA processing.RNA modification.mRNA... 0.02 OrthoFinder output from all 47 species
Aev_g11947 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aob_g04251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70454 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.06G073000.1 EMB1691, Ceric.06G073000 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.32G044700.1 EMB1691, Ceric.32G044700 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dcu_g05831 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ehy_g04045 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028893001 EMB1691 RNA processing.RNA modification.mRNA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g16180.1 EMB1691, LOC_Os01g16180 component MTB of adenosine N6-methyltransferase complex 0.02 OrthoFinder output from all 47 species
Len_g23589 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Lfl_g14383 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
MA_10435205g0010 EMB1691 component MTB of adenosine N6-methyltransferase complex 0.02 OrthoFinder output from all 47 species
Mp1g04450.1 EMB1691 component MTB of adenosine N6-methyltransferase complex 0.03 OrthoFinder output from all 47 species
Msp_g36898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28859 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pir_g07081 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g25302 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Zm00001e000382_P001 EMB1691, Zm00001e000382 component MTB of adenosine N6-methyltransferase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007757 MT-A70-like 697 874
No external refs found!