Sam_g08167


Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00145410 ATWRKY50,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AT2G37260 WRKY44, TTG2,... WRKY family transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT5G15130 WRKY72, ATWRKY72 WRKY DNA-binding protein 72 0.02 OrthoFinder output from all 47 species
Aop_g60353 WRKY23, ATWRKY23 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11216.t1 WRKY9, ATWRKY9,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18896.t1 ATWRKY57,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41969.t1 AtWRKY20,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41969.t2 AtWRKY20,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61067.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01943 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15071 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00870 WRKY3 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32126 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26921 WRKY4 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12963 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001332001 WRKY3 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01011356001 WRKY72, ATWRKY72 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01019511001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01024624001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01030258001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01037686001 WRKY6, ATWRKY6 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
Gb_39366 WRKY31, ATWRKY31 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27730.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
LOC_Os05g46020.1 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Lfl_g08941 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_134559g0010 WRKY31, ATWRKY31 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_47307g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Nbi_g06256 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15530 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63386 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g066370.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Solyc09g014990.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Tin_g46079 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005732_P002 ATWRKY57,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e022331_P001 WRKY53,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e025935_P001 ATWRKY50,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e027140_P002 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Zm00001e028011_P002 ATWRKY71,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e029092_P002 ATWRKY24,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e031518_P004 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Zm00001e032189_P001 WRKY56,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e038062_P002 WRKY4, Zm00001e038062 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 329 384
IPR003657 WRKY_dom 492 548
No external refs found!