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  5. Sam_g07944

Sam_g07944


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07944
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00141890 CRF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.02 OrthoFinder output from all 47 species
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.02 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.02 OrthoFinder output from all 47 species
Adi_g036820 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aev_g22086 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Als_g05586 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39098 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g48568 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62202 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04033 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aop_g07767 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g30341 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G088400.1 Ceric.01G088400 subgroup ERF-V transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G055400.1 Ceric.10G055400 not classified & original description: pacid=50611842... 0.03 OrthoFinder output from all 47 species
Ceric.28G014900.1 Ceric.28G014900 subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04627 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19848 RAP2.6 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03884 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25479 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g47766 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18185 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01001089001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01010630001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01021098001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01026334001 No alias Ethylene-responsive transcription factor ERF003... 0.02 OrthoFinder output from all 47 species
GSVIVT01028050001 HRE2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_19118 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_35633 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g45110.1 LOC_Os08g45110 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g13940.2 LOC_Os09g13940 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g01640 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08670 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_103035g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_166248g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_896002g0010 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp4g00380.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14031 ATERF4, RAP2.5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26195 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pir_g35803 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17102 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c3_9430V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 1 0.01 OrthoFinder output from all 47 species
Solyc07g054220.1.1 Solyc07g054220 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g05271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32809 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e016421_P001 CRF4, Zm00001e016421 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 228 273
No external refs found!