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  5. Sam_g07322

Sam_g07322


Description : pyrimidine monophosphate hydrolase & original description: none


Gene families : OG0008358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07322

Target Alias Description ECC score Gene Family Method Actions
AT2G38680 No alias 5'-nucleotidases;magnesium ion binding 0.02 OrthoFinder output from all 47 species
Adi_g006489 No alias pyrimidine monophosphate hydrolase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0696.g082592 No alias pyrimidine monophosphate hydrolase & original... 0.03 OrthoFinder output from all 47 species
Dde_g08082 No alias pyrimidine monophosphate hydrolase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g44660.1 LOC_Os03g44660 5prime-nucleotidase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008388 No alias pyrimidine monophosphate hydrolase & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008253 5'-nucleotidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006434 Pyrimidine_nucleotidase_eu 77 332
No external refs found!