Sam_g06428

Description : not classified & original description: none

Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g06428
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00094730	GBF1,...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Adi_g020136	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05567	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06008	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g18468	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g02743	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09577	bZIP16, AtbZIP16	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20755	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g29987	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000863.38	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Dcu_g09877	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g12482	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_40580	bZIP68, AtbZIP68	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
LOC_Os02g03580.1	bZIP68,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Len_g04717	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28097	bZIP68, AtbZIP68	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g15597	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19315	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18997	bZIP68, AtbZIP68	myosin adaptor protein *(MadA) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g17967	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g32830	bZIP16, AtbZIP16	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	154	216

External Links

No external refs found!

Sam_g06428

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation