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  5. Sam_g06235

Sam_g06235


Description : histone chaperone *(NAP) & original description: none


Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06235

Target Alias Description ECC score Gene Family Method Actions
AT3G13782 NAP1;4, NFA04, NFA4 nucleosome assembly protein1;4 0.03 OrthoFinder output from all 47 species
Adi_g060213 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078523 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078804 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g102779 NFA02, NFA2, NAP1;2 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62107 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04162.t1 NFA03, NFA3,... histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014775 ATNAP1;1, NAP1;1 histone chaperone *(NAP) & original description: CDS=127-1098 0.03 OrthoFinder output from all 47 species
Cba_g23410 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g46230.1 NFA02, NFA2,... histone chaperone (NAP) 0.02 OrthoFinder output from all 47 species
Nbi_g12928 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45547 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g62076 NFA02, NFA2, NAP1;2 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15776 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16940 No alias histone chaperone *(NAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51253 No alias histone chaperone *(NAP) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41321 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47534 ATNAP1;1, NAP1;1 histone chaperone *(NAP) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56275 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 54 323
No external refs found!