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  5. Sam_g06031

Sam_g06031


Description : component *(eL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0005508 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06031
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Adi_g119861 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g24304 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g66291 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Lfl_g31865 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g39769 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g22788 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g28028 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g11577 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g11793 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Sam_g20788 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g21586 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sam_g22989 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g46242 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Spa_g33115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g35733 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Spa_g43543 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g39709 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 1 65
No external refs found!