Sam_g05990


Description : not classified & original description: none


Gene families : OG0001623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001623_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g05990
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aop_g16943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g33018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g05954 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g31527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g31609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g46025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g34553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 7 123
No external refs found!