Sam_g05178

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g05178

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00015p00229650	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00050690	WRKY2, ATWRKY2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.02	OrthoFinder output from all 47 species
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	OrthoFinder output from all 47 species
Adi_g031754	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g041572	WRKY9, ATWRKY9	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g13852	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g44349	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g49345	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02563	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g10533	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g19223	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g39367	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03490	WRKY6, ATWRKY6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32004	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g48769	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05172	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g39081	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene39448.t1	WRKY3, Aspi01Gene39448	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene48248.t2	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49407.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0191.g056997	ATWRKY71, WRKY71	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.04G004800.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.04G004900.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.08G068500.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G001000.1	WRKY3, Ceric.13G001000	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.13G048400.1	WRKY3, Ceric.13G048400	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.20G087100.1	Ceric.20G087100	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g26985	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18304	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g18753	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31670	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03867	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08194	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08348	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08523	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10883	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15580	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26866	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012682001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_00544	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_00545	WRKY53, ATWRKY53	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_00546	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os01g09080.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g51690.1	ATWRKY51,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os06g06360.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os12g02420.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g24750	AtWRKY41, WRKY41	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434976g0010	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_49848g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_76002g0010	No alias	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g07746	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19708	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03566	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g08715	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g14900	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08142	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g12131	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20150	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20151	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25341	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06615	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03208	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024646	WRKY4	WRKY-type transcription factor & original description: CDS=1-1935	0.03	OrthoFinder output from all 47 species
Sam_g09440	No alias	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g29317	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g38149	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50657	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g095630.3.1	AtWRKY41,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g012500.3.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g068460.3.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc07g051840.4.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g008280.3.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc12g056750.3.1	ATWRKY51,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g37056	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g37539	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38478	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11625	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g42764	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009708_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e025096_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e030443_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e033860_P001	ATWRKY30,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	265	318

External Links

No external refs found!

Sam_g05178

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation