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  5. Sam_g03687

Sam_g03687


Description : not classified & original description: none


Gene families : OG0009033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03687
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aop_g34017 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species
Aop_g44769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47099 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Aop_g66249 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Dcu_g51214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g22152 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Sam_g27250 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Sam_g34593 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g38523 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Sam_g39487 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g40725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48292 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Sam_g52959 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008241 peptidyl-dipeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001254 Trypsin_dom 11 246
No external refs found!