Sam_g03432


Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03432
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Adi_g003220 gsl12, ATGSL12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019676 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024001 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060375 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38373 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28687 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g29718 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044473 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: CDS=278-4516 0.04 OrthoFinder output from all 47 species
Cba_g06816 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g19918 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G012200.1 GSL7, ATGSL07,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G062400.1 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G070800.1 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G064600.1 gsl12, ATGSL12,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Cre03.g185000 ATGSL10, gsl10, CALS9 Cell wall.callose.callose synthase 0.01 OrthoFinder output from all 47 species
Dac_g10697 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17127 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04954 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09376 GSL03, ATGSL3, ATGSL03 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21497 GSL03, ATGSL3, ATGSL03 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g02260.1 ATGSL08, ATGSL8,... callose synthase 0.02 OrthoFinder output from all 47 species
LOC_Os06g51270.1 gsl12, ATGSL12,... callose synthase 0.01 OrthoFinder output from all 47 species
Len_g54342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18468 ATGSL01, GSL01,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23993 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43330 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15152 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12628 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59927 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05356 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g12310 No alias EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Smo427055 ATGSL10, gsl10, CALS9 Cell wall.callose.callose synthase 0.05 OrthoFinder output from all 47 species
Zm00001e016293_P001 gsl12, ATGSL12,... callose synthase 0.02 OrthoFinder output from all 47 species
Zm00001e016298_P001 GSL06, ATGSL06,... callose synthase 0.02 OrthoFinder output from all 47 species
Zm00001e019786_P001 ATGSL01, GSL01,... callose synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA Interproscan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA Interproscan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 1 82
No external refs found!