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  5. Sam_g02588

Sam_g02588


Description : not classified & original description: none


Gene families : OG0000276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02588

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00013840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.02 OrthoFinder output from all 47 species
AT2G32010 CVL1 CVP2 like 1 0.03 OrthoFinder output from all 47 species
Aev_g28613 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ala_g08348 AT5PTASE2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Als_g24174 AT5PTASE2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g25003 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g23840 IP5PI, AT5P1,... EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g08780.1 LOC_Os01g08780 type-I inositol-polyphosphate 5-phosphatase 0.02 OrthoFinder output from all 47 species
LOC_Os05g41000.1 LOC_Os05g41000 type-I inositol-polyphosphate 5-phosphatase 0.02 OrthoFinder output from all 47 species
Mp1g23560.1 CVL1 type-I inositol-polyphosphate 5-phosphatase 0.02 OrthoFinder output from all 47 species
Ore_g14290 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g36172 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Solyc08g007080.4.1 AT5PTASE2,... type-I inositol-polyphosphate 5-phosphatase 0.02 OrthoFinder output from all 47 species
Solyc08g077210.4.1 AT5PTASE2,... type-I inositol-polyphosphate 5-phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e004762_P001 Zm00001e004762 type-I inositol-polyphosphate 5-phosphatase 0.02 OrthoFinder output from all 47 species
Zm00001e012330_P002 CVL1, Zm00001e012330 type-I inositol-polyphosphate 5-phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!