Sam_g01279


Description : not classified & original description: none


Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g01279
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G18100 E12A11, MFT PEBP (phosphatidylethanolamine-binding protein) family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025582 E12A11, MFT not classified & original description: CDS=171-818 0.04 OrthoFinder output from all 47 species
Ceric.06G045500.1 Ceric.06G045500 not classified & original description: pacid=50620154... 0.04 OrthoFinder output from all 47 species
Ceric.22G072500.1 Ceric.22G072500 not classified & original description: pacid=50613817... 0.02 OrthoFinder output from all 47 species
Ceric.22G072600.1 Ceric.22G072600 not classified & original description: pacid=50614502... 0.04 OrthoFinder output from all 47 species
Ceric.34G007800.1 Ceric.34G007800 not classified & original description: pacid=50623830... 0.02 OrthoFinder output from all 47 species
LOC_Os01g54490.1 FT, LOC_Os01g54490 PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06300.1 FT, LOC_Os06g06300 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Pp3c14_18740V3.1 E12A11, MFT, Pp3c14_18740 PEBP (phosphatidylethanolamine-binding protein) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g10997 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g58271 FT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011036 FT not classified & original description: CDS=209-856 0.02 OrthoFinder output from all 47 species
Sam_g04982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g079290.3.1 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Solyc05g055660.3.1 FT, Solyc05g055660 PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
Solyc06g074350.3.1 ATC, Solyc06g074350 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Spa_g24387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008220_P001 ATC, Zm00001e008220 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e008880_P001 TSF, Zm00001e008880 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e026057_P001 FT, Zm00001e026057 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e027418_P001 FT, Zm00001e027418 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e039371_P002 ATC, Zm00001e039371 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008914 PEBP 101 195
No external refs found!