Aliases : WRKY42, AtWRKY42
Description : WRKY-type transcription factor & original description: none
Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g24898 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00160270 | WRKY75,... | RNA biosynthesis.transcriptional activation.WRKY... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00065p00201830 | ATWRKY40,... | RNA biosynthesis.transcriptional activation.WRKY... | 0.02 | OrthoFinder output from all 47 species | |
AT1G64000 | WRKY56, ATWRKY56 | WRKY DNA-binding protein 56 | 0.03 | OrthoFinder output from all 47 species | |
AT3G01970 | ATWRKY45, WRKY45 | WRKY DNA-binding protein 45 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g031754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g44349 | WRKY4 | WRKY-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g21159 | ATWRKY24, WRKY24 | WRKY-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene27651.t1 | WRKY43,... | WRKY-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0469.g072878 | WRKY4 | WRKY-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g43124 | WRKY3 | WRKY-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g44250 | WRKY6, ATWRKY6 | WRKY-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g12270 | WRKY55, ATWRKY55 | WRKY-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g13568 | WRKY28, ATWRKY28 | WRKY-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012682001 | WRKY6, ATWRKY6 | RNA biosynthesis.transcriptional activation.WRKY... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01028147001 | WRKY23, ATWRKY23 | RNA biosynthesis.transcriptional activation.WRKY... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033063001 | WRKY75, ATWRKY75 | RNA biosynthesis.transcriptional activation.WRKY... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g14440.1 | WRKY6, ATWRKY6,... | transcription factor (WRKY) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g47560.1 | ATWRKY71,... | transcription factor (WRKY) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g60490.1 | WRKY62,... | transcription factor (WRKY) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g62510.1 | ATWRKY57,... | transcription factor (WRKY) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g08440.1 | ATWRKY40,... | transcription factor (WRKY) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g39720.1 | WRKY33,... | transcription factor (WRKY). transcription factor (WRKY33) | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g30041 | WRKY18, ATWRKY18 | WRKY-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_11072g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_114377g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_133396g0010 | ATWRKY50, WRKY50 | transcription factor (WRKY) | 0.03 | OrthoFinder output from all 47 species | |
MA_164675g0010 | WRKY42, AtWRKY42 | transcription factor (WRKY) | 0.03 | OrthoFinder output from all 47 species | |
MA_451720g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Smo29146 | WRKY6, ATWRKY6 | RNA biosynthesis.transcriptional activation.WRKY... | 0.05 | OrthoFinder output from all 47 species | |
Solyc05g015850.4.1 | WRKY75,... | transcription factor (WRKY) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g019160.2.1 | WRKY26, Solyc10g019160 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e025096_P001 | ATWRKY40,... | transcription factor (WRKY) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e025935_P001 | ATWRKY50,... | transcription factor (WRKY) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e033862_P001 | WRKY53,... | transcription factor (WRKY) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e036514_P001 | WRKY72,... | transcription factor (WRKY) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001101 | response to acid chemical | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
BP | GO:0009415 | response to water | IEP | HCCA |
BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
CC | GO:0048046 | apoplast | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003657 | WRKY_dom | 188 | 244 |
No external refs found! |