Aob_g34747


Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000449 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g34747
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Adi_g119385 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Adi_g127327 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ala_g29151 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g38766 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Aob_g40872 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Aob_g41855 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Cba_g78021 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dde_g45671 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ehy_g16099 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Ehy_g28115 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g34094 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 39 species
Nbi_g42560 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Pir_g06143 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Pir_g61076 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g09971 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g10605 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g21216 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g27556 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g42305 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g44489 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g44490 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Sam_g31433 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Sam_g47565 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Spa_g37894 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Tin_g36178 No alias component *(RPP2) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030248 cellulose binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!