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  5. Aob_g30583

Aob_g30583 (LEP)


Aliases : LEP

Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30583
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 HRE2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00099690 RAP2.6,... Ethylene-responsive transcription factor ERF110... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
Als_g27070 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g15011 DEAR3 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene27644.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43206.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0070.g036745 ATERF-9, ERF9, ATERF9 not classified & original description: CDS=1-3831 0.02 OrthoFinder output from all 47 species
Cba_g10613 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g26267 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G057600.1 RAP2.2, Ceric.04G057600 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ceric.22G080600.1 ATERF-9, ERF9,... not classified & original description: pacid=50614657... 0.04 OrthoFinder output from all 47 species
Ceric.39G001200.1 ATERF-9, ERF9,... not classified & original description: pacid=50583216... 0.03 OrthoFinder output from all 47 species
Cre16.g661650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09321 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dcu_g08328 LEP not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17593 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00959 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ehy_g03378 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08401 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08781 ABI4, SAN5,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_25978 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4... 0.03 OrthoFinder output from all 47 species
LOC_Os05g27930.1 DREB2A, DREB2,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g13186 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g13205 No alias subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16792 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pnu_g26066 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_13860V3.1 ATERF-9, ERF9,... ethylene responsive element binding factor 4 0.01 OrthoFinder output from all 47 species
Ppi_g10553 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g17524 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021048 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g025993 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Sam_g18921 No alias transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Sam_g52552 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g008890.4.1 CRF4, Solyc01g008890 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g049560.2.1 RAP2.2, Solyc12g049560 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g22552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13149 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023748_P001 RAP2.12, Zm00001e023748 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR025927 Potential_DNA-bd 347 409
IPR001471 AP2/ERF_dom 711 759
IPR003340 B3_DNA-bd 54 135
No external refs found!