1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g28481

Aob_g28481


Description : not classified & original description: none


Gene families : OG0000045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g28481
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00201760 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00004p00119400 evm_27.TU.AmTr_v1... Mavicyanin OS=Cucurbita pepo 0.02 OrthoFinder output from all 47 species
AMTR_s00004p00121060 evm_27.TU.AmTr_v1... Blue copper protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00116250 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G23990 AtENODL11, ENODL11 early nodulin-like protein 11 0.02 OrthoFinder output from all 47 species
AT4G12880 AtENODL19, ENODL19 early nodulin-like protein 19 0.03 OrthoFinder output from all 47 species
AT4G27520 AtENODL2, ENODL2 early nodulin-like protein 2 0.06 OrthoFinder output from all 47 species
AT5G07475 No alias Cupredoxin superfamily protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene41173.t1 UCC1, Aspi01Gene41173 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41413.t1 ENODL14,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G050600.1 Ceric.33G050600 not classified & original description: pacid=50607002... 0.02 OrthoFinder output from all 47 species
GSVIVT01010003001 ARPN Basic blue protein OS=Cucumis sativus 0.02 OrthoFinder output from all 47 species
GSVIVT01011475001 ENODL20, AtENODL20 Lamin-like protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01014311001 ENODL3, AtENODL3 Early nodulin-like protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017332001 No alias Cucumber peeling cupredoxin OS=Cucumis sativus 0.04 OrthoFinder output from all 47 species
LOC_Os05g49580.1 LOC_Os05g49580 Cucumber peeling cupredoxin OS=Cucumis sativus... 0.03 OrthoFinder output from all 47 species
MA_10258695g0010 AtENODL9, ENODL9 Early nodulin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436982g0010 AtENODL9, ENODL9 Early nodulin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_18667g0010 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_2828g0010 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 104.0) 0.02 OrthoFinder output from all 47 species
MA_52098g0010 AtENODL9, ENODL9 Early nodulin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g24477 UCC1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c25_13140V3.1 ENODL12,... early nodulin-like protein 1 0.01 OrthoFinder output from all 47 species
Solyc04g074740.4.1 Solyc04g074740 Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 132.0) 0.03 OrthoFinder output from all 47 species
Solyc07g008130.3.1 Solyc07g008130 Umecyanin OS=Armoracia rusticana (sp|p42849|umec_armru : 98.2) 0.04 OrthoFinder output from all 47 species
Zm00001e005736_P001 ENODL17,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013703_P001 AtENODL9,... Early nodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 48 128
No external refs found!