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  5. Aob_g23401

Aob_g23401 (PEPC1, ATPEPC1, ATPPC1, PPC1)


Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g23401
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT3G14940 ATPPC3, PPC3 phosphoenolpyruvate carboxylase 3 0.03 OrthoFinder output from all 47 species
Aspi01Gene28190.t1 PPC2, ATPPC2,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0091.g042910 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: CDS=48-2978 0.04 OrthoFinder output from all 47 species
Cba_g14717 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g14770.1 PPC2, ATPPC2,... PEP carboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 49 977
No external refs found!