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  5. Lfl_g23100

Lfl_g23100 (RAN2)


Aliases : RAN2

Description : GTPase *(Ran) & original description: none


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g23100
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT5G20010 RAN1, RAN-1, ATRAN1 RAS-related nuclear protein-1 0.02 OrthoFinder output from all 47 species
Aop_g03747 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45894 RAN2 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g44710 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02347 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015482001 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Mp2g19920.1 RAN2 Ran GTPase 0.02 OrthoFinder output from all 47 species
Msp_g36246 RAN2 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g27776 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g07556 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24464 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55106 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04345 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 168
No external refs found!