Lfl_g23100 (RAN2)

Aliases : RAN2

Description : GTPase *(Ran) & original description: none

Gene families : OG0000076 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g23100
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
Ala_g04575	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Azfi_s0147.g053043	RAN2	GTPase *(Ran) & original description: CDS=1-873	0.01	OrthoFinder output from all 39 species
Azfi_s0548.g076431	RAN2	GTPase *(Ran) & original description: CDS=1-873	0.01	OrthoFinder output from all 39 species
Ceric.35G063800.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50581751...	0.01	OrthoFinder output from all 39 species
Dac_g04997	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 39 species
Dac_g44710	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 39 species
Dde_g08971	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Dde_g15867	RAN2	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
GSVIVT01015482001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 39 species
GSVIVT01035804001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.01	OrthoFinder output from all 39 species
Gb_40279	No alias	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum...	0.01	OrthoFinder output from all 39 species
Gb_40281	RAN1, RAN-1, ATRAN1	Ran GTPase	0.01	OrthoFinder output from all 39 species
Len_g19642	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Len_g42945	RAN2	not classified & original description: none	0.01	OrthoFinder output from all 39 species
Mp2g19920.1	RAN2	Ran GTPase	0.01	OrthoFinder output from all 39 species
Msp_g36246	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 39 species
Ppi_g06209	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Ppi_g11566	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Sam_g19307	No alias	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Solyc01g104680.4.1	RAN2, Solyc01g104680	Ran GTPase	0.01	OrthoFinder output from all 39 species
Spa_g07556	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 39 species
Spa_g24464	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.01	OrthoFinder output from all 39 species
Tin_g04345	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 39 species
Zm00001e032496_P003	RAN3, ATRAN3,...	Ran GTPase	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
CC	GO:0061617	MICOS complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	12	168

External Links

No external refs found!

Lfl_g23100 (RAN2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation