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  5. Aob_g18832

Aob_g18832


Description : ribosome docking factor *(MDM38) & original description: none


Gene families : OG0002125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00145760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g13105 No alias ribosome docking factor *(MDM38) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G129300.1 Ceric.01G129300 ribosome docking factor *(MDM38) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g07319 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g39550.1 LOC_Os02g39550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g02254 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06315 No alias ribosome docking factor *(MDM38) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13565 No alias ribosome docking factor *(MDM38) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011923 No alias ribosome docking factor *(MDM38) & original description:... 0.02 OrthoFinder output from all 47 species
Smo415389 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e026946_P001 Zm00001e026946 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043022 ribosome binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR033122 LETM1-like_RBD 260 492
No external refs found!