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  5. Aob_g18799

Aob_g18799


Description : not classified & original description: none


Gene families : OG0008483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18799
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g018628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02320 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g23175 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g11433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58266.t1 Aspi01Gene58266 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008132 No alias not classified & original description: CDS=109-1671 0.07 OrthoFinder output from all 47 species
Cba_g12183 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.39G049100.1 Ceric.39G049100 not classified & original description: pacid=50583129... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020552.3 No alias CDK5RAP1-like protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g09097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26476 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g14896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04674 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g47184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11286 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g09640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014167 No alias not classified & original description: CDS=261-1784 0.04 OrthoFinder output from all 47 species
Sam_g10588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 221 400
IPR002792 TRAM_dom 454 517
IPR013848 Methylthiotransferase_N 77 175
No external refs found!