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  5. Aob_g18492

Aob_g18492


Description : not classified & original description: none


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18492

Target Alias Description ECC score Gene Family Method Actions
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.03 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g12145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G011400.1 Ceric.16G011400 not classified & original description: pacid=50589110... 0.02 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.08 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g17486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.08 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 83 241
No external refs found!