Aob_g18441


Description : component *(cS23) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18441

Target Alias Description ECC score Gene Family Method Actions
Als_g02788 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g28969 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46394.t1 Aspi01Gene46394 component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031601 No alias component *(cS23) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Azfi_s0405.g068388 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g17074 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cba_g32123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G039300.1 Ceric.23G039300 component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre02.g083950 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dde_g08494 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g13740 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g06384 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Len_g27723 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Len_g56473 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g05910 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g18227 No alias component *(cS23) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pnu_g09092 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ppi_g18636 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017327 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g39979 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo77941 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc03g034190.3.1 Solyc03g034190 component psPSRP3 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Solyc05g009570.3.1 Solyc05g009570 component psPSRP3 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g06637 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Tin_g12630 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR006924 Ribosomal_PSRP3/Ycf65 121 167
No external refs found!