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  5. Aob_g16735

Aob_g16735


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g16735

Target Alias Description ECC score Gene Family Method Actions
Adi_g019345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g24124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11718.t1 Aspi01Gene11718 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.04 OrthoFinder output from all 47 species
Dcu_g02797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001276 No alias not classified & original description: CDS=1-1002 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.02 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 534 566
IPR002885 Pentatricopeptide_repeat 194 222
IPR002885 Pentatricopeptide_repeat 229 257
IPR002885 Pentatricopeptide_repeat 259 308
IPR002885 Pentatricopeptide_repeat 714 762
IPR002885 Pentatricopeptide_repeat 399 448
IPR002885 Pentatricopeptide_repeat 573 622
IPR002885 Pentatricopeptide_repeat 783 830
IPR002885 Pentatricopeptide_repeat 643 692
IPR002885 Pentatricopeptide_repeat 329 377
IPR002885 Pentatricopeptide_repeat 468 517
No external refs found!