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  5. Aob_g15621

Aob_g15621


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15621
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Smo442211 EMB2761 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 396 607
IPR004095 TGS 81 138
IPR004154 Anticodon-bd 619 707
IPR012947 tRNA_SAD 248 297
No external refs found!