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  5. Aob_g14455

Aob_g14455


Description : not classified & original description: none


Gene families : OG0000408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g14455

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene23914.t1 Aspi01Gene23914 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54613.t1 Aspi01Gene54613 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025558 DUF4283 32 97
IPR001878 Znf_CCHC 163 179
No external refs found!