Aob_g13559 (ATHB13)


Aliases : ATHB13

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g13559
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00215130 ATHB5, ATHB-5,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Aev_g07423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09308 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g10709 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene20017.t1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42458.t1 ATHB21, HB21,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53135.t1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene58187.t1 Aspi01Gene58187 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g39032 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g17323 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02341 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
GSVIVT01020033001 ATHB13 RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
GSVIVT01027407001 HB-7, ATHB-7, ATHB7 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
LOC_Os09g21180.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Len_g19610 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g56176 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_128g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.07 OrthoFinder output from all 47 species
Nbi_g07247 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g07340 HB6, ATHB6 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ore_g21633 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g45630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19828 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pir_g40617 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016096 ATHB5, ATHB-5, HB5 not classified & original description: CDS=182-1414 0.01 OrthoFinder output from all 47 species
Solyc02g086930.4.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Tin_g44726 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 80 134
IPR003106 Leu_zip_homeo 135 168
No external refs found!