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  5. Aob_g11767

Aob_g11767 (ABO1, ELO2)


Aliases : ABO1, ELO2

Description : component *(ELP1) of ELONGATOR transcription elongation complex & original description: none


Gene families : OG0006371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g11767

Target Alias Description ECC score Gene Family Method Actions
AT5G13680 ABO1, ELO2 IKI3 family protein 0.03 OrthoFinder output from all 47 species
Aev_g35033 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species
Cba_g12219 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.05 OrthoFinder output from all 47 species
Ceric.14G027500.1 ABO1, ELO2,... component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.40 ABO1, ELO2 Elongator complex protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g09746 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.05 OrthoFinder output from all 47 species
Ehy_g14344 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
LOC_Os07g37640.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.02 OrthoFinder output from all 47 species
Lfl_g09984 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Nbi_g04458 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Ppi_g43871 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Solyc05g054630.4.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.02 OrthoFinder output from all 47 species
Spa_g17971 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEA Interproscan
CC GO:0033588 elongator holoenzyme complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR006849 Elp1 1 1002
No external refs found!