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  5. Aob_g11687

Aob_g11687 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : transcriptional regulator *(HsfA1) & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g11687

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00209530 HSFA1E,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AT5G45710 HSFA4C, RHA1, AT-HSFA4C winged-helix DNA-binding transcription factor family protein 0.03 OrthoFinder output from all 47 species
Aob_g08951 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G066500.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g20880 AT-HSFA6B, HSFA6B not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g12370.1 HSFA1B, ATHSF3,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58160.1 AT-HSFA6B,... transcription factor (HSF) 0.05 OrthoFinder output from all 47 species
Ore_g18363 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27108 ATHSFA1D, HSFA1D transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31638 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Solyc03g006000.3.1 HSF A4A,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc08g062960.4.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.08 OrthoFinder output from all 47 species
Solyc08g076590.3.1 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 OrthoFinder output from all 47 species
Solyc09g082670.3.1 AT-HSFA6B,... transcription factor (HSF) 0.05 OrthoFinder output from all 47 species
Spa_g10058 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034782_P002 AT-HSFB2A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 55 144
No external refs found!