Aob_g11371

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g11371

Target	Alias	Description	ECC score	Gene Family Method
AT3G02840	No alias	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16119	PUB25	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05204	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g12714	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23185	CMPG1, ATCMPG1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32770	PUB15	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g57047	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g60936	PUB25	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17992.t1	PUB25, Aspi01Gene17992	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18452.t1	PUB25, Aspi01Gene18452	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18453.t1	PUB25, Aspi01Gene18453	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g01209	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04516	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03660	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11880	CMPG1, ATCMPG1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g16036	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16356	PUB22	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01031720001	PUB26	U-box domain-containing protein 26 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01037585001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_17119	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_27794	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os04g49970.1	PUB23, LOC_Os04g49970	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os12g06410.1	PUB24, LOC_Os12g06410	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g11599	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g47390	PUB25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g10378	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29544	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29886	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g36530	PUB23	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37565	PUB26	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42463	PUB23	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g42738	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g007010.2.1	PUB22, Solyc01g007010	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e007109_P001	PUB23, Zm00001e007109	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014752_P001	PUB23, Zm00001e014752	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	9	77

External Links

No external refs found!

Aob_g11371

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation