Aliases : ATSS4, SS4, SSIV
Description : starch synthase *(SS4) & original description: none
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g13690 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g02616 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g57843 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene02950.t1 | Aspi01Gene02950 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene43820.t1 | ATSS4, SS4,... | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g663850 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g01991 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g50824 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g56320.1 | LOC_Os02g56320 | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g53310.1 | ATSS3, SS3,... | starch synthase (SSIII) | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05596 | ATSS4, SS4, SSIV | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_675870g0010 | ATSS3, SS3 | Soluble starch synthase 3, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g13857 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g14771 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g07616 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g12030 | No alias | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g51042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g26732 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006886_P001 | ATSS3, SS3,... | starch synthase (SSIII) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016757 | glycosyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | HCCA |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
CC | GO:0005811 | lipid droplet | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016298 | lipase activity | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0019915 | lipid storage | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0051235 | maintenance of location | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |