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Description : not classified & original description: none
Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g21916 | |
| Cluster | HCCA: Cluster_47 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G29520 | No alias | AWPM-19-like family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G46530 | No alias | AWPM-19-like family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10328 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18937 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G074200.1 | Ceric.30G074200 | not classified & original description: pacid=50608798... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G005100.1 | Ceric.37G005100 | not classified & original description: pacid=50616791... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017867001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35398 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| MA_101266g0010 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428394g0010 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| MA_257474g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g24745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g01539 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007798 | No alias | not classified & original description: CDS=1-543 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06806 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g080290.3.1 | Solyc01g080290 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g071310.3.1 | Solyc02g071310 | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g053160.3.1 | Solyc05g053160 | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16199 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11428 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e020052_P001 | Zm00001e020052 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026824_P001 | Zm00001e026824 | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028127_P001 | Zm00001e028127 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0007021 | tubulin complex assembly | IEP | HCCA |
| BP | GO:0007023 | post-chaperonin tubulin folding pathway | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0048487 | beta-tubulin binding | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008390 | AWPM-19 | 1 | 118 |
| No external refs found! |