Aob_g06436 (OLI7, RPL5B)


Aliases : OLI7, RPL5B

Description : component *(uL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002471_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06436

Target Alias Description ECC score Gene Family Method Actions
AT5G39740 OLI7, RPL5B ribosomal protein L5 B 0.03 OrthoFinder output from all 47 species
Azfi_s0136.g050950 OLI7, RPL5B not classified & original description: CDS=209-979 0.02 OrthoFinder output from all 47 species
GSVIVT01001906001 No alias 60S ribosomal protein L5 OS=Cucumis sativus 0.05 OrthoFinder output from all 47 species
LOC_Os01g67134.1 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pir_g01232 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pir_g34327 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g10597 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g10501 No alias component *(uL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo144921 OLI5, RPL5A, PGY3, ATL5 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc06g007670.4.1 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e000256_P001 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e018972_P001 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e028563_P004 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 14 175
IPR025607 Rbsml_L5e_C 235 288
No external refs found!