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  5. Lfl_g21556

Lfl_g21556


Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0001436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21556
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT4G39090 RD19A, RD19 Papain family cysteine protease 0.04 OrthoFinder output from all 47 species
Adi_g047048 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Als_g37038 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Als_g37071 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Ceric.05G067800.1 RD19A, RD19,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dcu_g04601 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
GSVIVT01009807001 RD19A, RD19 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01009810001 RD19A, RD19 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os02g27030.1 RD19A, RD19,... protease (Papain) 0.02 OrthoFinder output from all 47 species
Len_g29963 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Mp4g16890.1 No alias protease (Papain) 0.02 OrthoFinder output from all 47 species
Pir_g31698 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022783 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g11102 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Solyc04g080960.4.1 Solyc04g080960 protease (Papain) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 142 365
IPR013201 Prot_inhib_I29 58 114
No external refs found!