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  5. Aob_g04381

Aob_g04381 (ATMRE11, MRE11)


Aliases : ATMRE11, MRE11

Description : component *(MRE11) of DNA resection MRE11-RAD50-NBS1 (MRN) complex & original description: none


Gene families : OG0004519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004519_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g04381

Target Alias Description ECC score Gene Family Method Actions
Aop_g15412 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.02 OrthoFinder output from all 47 species
Ceric.07G079200.1 ATMRE11, MRE11,... component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.03 OrthoFinder output from all 47 species
Dac_g06507 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.02 OrthoFinder output from all 47 species
Dcu_g20299 ATMRE11, MRE11 component *(MRE11) of DNA resection MRE11-RAD50-NBS1... 0.05 OrthoFinder output from all 47 species
Smo85158 ATMRE11, MRE11 DNA damage response.DNA repair mechanisms.homologous... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007281 Mre11_DNA-bd 304 457
IPR004843 Calcineurin-like_PHP_ApaH 14 258
No external refs found!