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  5. Aob_g03310

Aob_g03310


Description : alkaline sucrose-specific invertase *(CIN) & original description: none


Gene families : OG0000598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03310

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00232150 evm_27.TU.AmTr_v1... Probable alkaline/neutral invertase B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G09510 CINV2 cytosolic invertase 2 0.02 OrthoFinder output from all 47 species
Adi_g103457 CINV2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01210 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Als_g11156 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Aop_g12615 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11293.t1 Aspi01Gene11293 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18472.t1 CINV2, Aspi01Gene18472 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene45020.t1 Aspi01Gene45020 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Dde_g22613 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.01 OrthoFinder output from all 47 species
Dde_g25563 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05905 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g13138 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01009904001 No alias Probable alkaline/neutral invertase B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037429001 No alias Probable alkaline/neutral invertase F OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g11430 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g11308 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g03845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001869 No alias not classified & original description: CDS=1-2139 0.02 OrthoFinder output from all 47 species
Solyc01g111100.5.1 Solyc01g111100 alkaline sucrose-specific invertase (CIN) 0.03 OrthoFinder output from all 47 species
Zm00001e009039_P001 CINV2, Zm00001e009039 alkaline sucrose-specific invertase (CIN) 0.02 OrthoFinder output from all 47 species
Zm00001e023410_P002 CINV2, Zm00001e023410 alkaline sucrose-specific invertase (CIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR024746 Glyco_hydro_100 115 550
No external refs found!