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  5. Aob_g03139

Aob_g03139 (APG3)


Aliases : APG3

Description : translation peptide chain release factor *(PrfA) & original description: none


Gene families : OG0002151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03139
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00193080 APG3,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT3G62910 APG3 Peptide chain release factor 1 0.06 OrthoFinder output from all 47 species
Ala_g02141 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Als_g00810 APG3 translation peptide chain release factor *(PrfA) &... 0.04 OrthoFinder output from all 47 species
Aop_g21825 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Ceric.06G071000.1 APG3, Ceric.06G071000 translation peptide chain release factor *(PrfA) &... 0.07 OrthoFinder output from all 47 species
Cre16.g673617 APG3 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dde_g25196 APG3 translation peptide chain release factor *(PrfA) &... 0.05 OrthoFinder output from all 47 species
GSVIVT01010979001 APG3 Protein biosynthesis.organelle translation... 0.1 OrthoFinder output from all 47 species
LOC_Os11g43600.1 APG3, LOC_Os11g43600 PrfA-type translation peptide chain release factor 0.04 OrthoFinder output from all 47 species
Lfl_g30957 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Mp5g08280.1 APG3 PrfA-type translation peptide chain release factor 0.05 OrthoFinder output from all 47 species
Msp_g06484 APG3 translation peptide chain release factor *(PrfA) &... 0.04 OrthoFinder output from all 47 species
Ore_g07055 APG3 translation peptide chain release factor *(PrfA) &... 0.05 OrthoFinder output from all 47 species
Pir_g17362 APG3 translation peptide chain release factor *(PrfA) &... 0.04 OrthoFinder output from all 47 species
Pnu_g26949 APG3 translation peptide chain release factor *(PrfA) &... 0.02 OrthoFinder output from all 47 species
Pp3c7_80V3.1 APG3, Pp3c7_80 Peptide chain release factor 1 0.02 OrthoFinder output from all 47 species
Smo141857 APG3 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc09g074650.3.1 APG3, Solyc09g074650 PrfA-type translation peptide chain release factor 0.04 OrthoFinder output from all 47 species
Spa_g22066 APG3 translation peptide chain release factor *(PrfA) &... 0.06 OrthoFinder output from all 47 species
Tin_g15456 APG3 translation peptide chain release factor *(PrfA) &... 0.03 OrthoFinder output from all 47 species
Zm00001e021069_P003 APG3, Zm00001e021069 PrfA-type translation peptide chain release factor 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 291 401
IPR005139 PCRF 91 284
No external refs found!