Aob_g02563

Description : component *(eL37) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0002755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g02563
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00029660	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
AT1G15250	No alias	Zinc-binding ribosomal protein family protein	0.03	OrthoFinder output from all 47 species
AT1G52300	No alias	Zinc-binding ribosomal protein family protein	0.09	OrthoFinder output from all 47 species
AT3G16080	No alias	Zinc-binding ribosomal protein family protein	0.1	OrthoFinder output from all 47 species
Ala_g31967	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Aop_g22710	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g28619	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Aop_g67698	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aspi01Gene09915.t1	Aspi01Gene09915	component *(eL37) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0375.g067257	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ceric.13G060700.1	Ceric.13G060700	component *(eL37) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Ceric.17G080500.1	Ceric.17G080500	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020610.80	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Cre10.g430400	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	OrthoFinder output from all 47 species
Dac_g40440	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dac_g42769	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01017081001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
GSVIVT01035677001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
Gb_29003	No alias	component RPL37 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Gb_33514	No alias	component RPL37 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os02g56990.1	LOC_Os02g56990	component RPL37 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os08g03450.1	LOC_Os08g03450	component RPL37 of LSU proteome component	0.06	OrthoFinder output from all 47 species
MA_129829g0010	No alias	component RPL37 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Mp2g12400.1	No alias	component RPL37 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Pp3c15_4370V3.1	Pp3c15_4370	Zinc-binding ribosomal protein family protein	0.05	OrthoFinder output from all 47 species
Pp3c18_13160V3.1	Pp3c18_13160	Zinc-binding ribosomal protein family protein	0.08	OrthoFinder output from all 47 species
Pp3c20_2550V3.1	Pp3c20_2550	Zinc-binding ribosomal protein family protein	0.05	OrthoFinder output from all 47 species
Pp3c21_9910V3.1	Pp3c21_9910	Zinc-binding ribosomal protein family protein	0.02	OrthoFinder output from all 47 species
Pp3c23_17260V3.1	Pp3c23_17260	Zinc-binding ribosomal protein family protein	0.04	OrthoFinder output from all 47 species
Pp3c9_8500V3.1	Pp3c9_8500	Zinc-binding ribosomal protein family protein	0.03	OrthoFinder output from all 47 species
Sam_g18328	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc06g066660.4.1	Solyc06g066660	component RPL37 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Spa_g37746	No alias	component *(eL37) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e001908_P001	Zm00001e001908	component RPL37 of LSU proteome component	0.08	OrthoFinder output from all 47 species
Zm00001e013434_P001	Zm00001e013434	component RPL37 of LSU proteome component	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001569	Ribosomal_L37e	37	87

External Links

No external refs found!

Aob_g02563

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation