Aliases : CLPP3, NCLPP3
Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0000552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G45390 | NCLPP4, CLPP4 | CLP protease P4 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g020606 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g486100 | NCLPP1, CLPP5, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
Cre12.g500950 | NCLPP4, CLPP4 | Protein degradation.peptidase families.serine-type... | 0.01 | OrthoFinder output from all 47 species | |
Gb_02667 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g37808 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c24_11660V3.1 | NCLPP1, CLPP5,... | nuclear encoded CLP protease 5 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0002.g001045 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026353_P001 | CLPP3, NCLPP3,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023562 | ClpP/TepA | 81 | 253 |
No external refs found! |