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  5. Lfl_g20659

Lfl_g20659


Description : assembly factor (eIF1) of eIF1 & original description: none


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g20659
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266770 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Ala_g00314 No alias assembly factor (eIF1) of eIF1 & original description: none 0.05 OrthoFinder output from all 47 species
Als_g42471 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43580 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Als_g47733 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene67771.t1 Aspi01Gene67771 assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67772.t1 Aspi01Gene67772 assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene67773.t1 Aspi01Gene67773 assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67777.t1 Aspi01Gene67777 assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29211 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G008800.1 Ceric.06G008800 assembly factor (eIF1) of eIF1 & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g28226 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001974001 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Gb_09385 No alias assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
Len_g46868 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g06395 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08123 No alias assembly factor (eIF1) of eIF1 & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11927 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61621 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.05 OrthoFinder output from all 47 species
Spa_g02983 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22324 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34342 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 78 142
No external refs found!