MA_117650g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION22 (CRR22)


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_117650g0010
Cluster HCCA cluster: Cluster_578

Target Alias Description ECC score Gene Family Method Actions
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
Smo105356 PACid_15414251 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo51483 PACid_15409094 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 41 82
IPR002885 Pentatricopeptide_repeat 162 184
IPR002885 Pentatricopeptide_repeat 565 586
IPR002885 Pentatricopeptide_repeat 185 227
IPR002885 Pentatricopeptide_repeat 387 434
IPR002885 Pentatricopeptide_repeat 488 535
IPR002885 Pentatricopeptide_repeat 84 127
IPR002885 Pentatricopeptide_repeat 286 332
IPR032867 DYW_dom 665 728
No external refs found!