Lfl_g20427

Description : component *(eL33) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000881_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g20427
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00195890	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT1G41880	No alias	Ribosomal protein L35Ae family protein	0.03	OrthoFinder output from all 47 species
AT1G74270	No alias	Ribosomal protein L35Ae family protein	0.02	OrthoFinder output from all 47 species
AT3G55750	No alias	Ribosomal protein L35Ae family protein	0.03	OrthoFinder output from all 47 species
Adi_g018361	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Adi_g107649	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Adi_g107650	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ala_g22035	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Ala_g23556	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g35374	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g28942	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g32442	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g51649	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020723.23	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Cre10.g459250	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Dac_g01908	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dac_g28494	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Dcu_g24483	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g44100	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01016386001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01034025001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
Gb_35488	No alias	component RPL35a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Len_g50836	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Lfl_g19455	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Mp1g11470.1	No alias	component RPL35a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Pir_g03777	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g53979	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c11_9630V3.1	Pp3c11_9630	Ribosomal protein L35Ae family protein	0.03	OrthoFinder output from all 47 species
Pp3c3_3480V3.1	Pp3c3_3480	Ribosomal protein L35Ae family protein	0.04	OrthoFinder output from all 47 species
Pp3c4_29970V3.1	Pp3c4_29970	Ribosomal protein L35Ae family protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027080	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g05626	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g21165	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g28484	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g38110	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g38788	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g42222	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Solyc03g096360.4.1	Solyc03g096360	component RPL35a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Solyc05g052800.3.1	Solyc05g052800	component RPL35a of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc05g052810.4.1	Solyc05g052810	component RPL35a of LSU proteome component	0.05	OrthoFinder output from all 47 species
Spa_g05815	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Tin_g02369	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Tin_g40940	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Zm00001e009729_P001	Zm00001e009729	component RPL35a of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e023741_P003	Zm00001e023741	component RPL35a of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0004097	catechol oxidase activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001780	Ribosomal_L35A	11	105

External Links

No external refs found!

Lfl_g20427

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation