Dde_g46169 (TOPII, ATTOPII)

Aliases : TOPII, ATTOPII

Description : DNA topoisomerase *(TOP2) & original description: none

Gene families : OG0002559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g46169
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00101630	TOPII, ATTOPII,...	Cell cycle.interphase.DNA replication.preinitiation.TOP2...	0.05	OrthoFinder output from all 47 species
Ala_g25823	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g04680	TOPII, ATTOPII	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g14096	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g14194	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene03757.t1	TOPII, ATTOPII,...	DNA topoisomerase *(TOP2) & original description: none	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021432.55	TOPII, ATTOPII	DNA topoisomerase 2 OS=Pisum sativum	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021433.1	TOPII, ATTOPII	DNA topoisomerase 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021433.2	TOPII, ATTOPII	DNA topoisomerase 2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g12747	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.07	OrthoFinder output from all 47 species
Len_g32193	TOPII, ATTOPII	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g37198	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g07573	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03282	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g08991	No alias	DNA topoisomerase *(TOP2) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g50976	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11875	TOPII, ATTOPII	DNA topoisomerase *(TOP2) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003916	DNA topoisomerase activity	None	Extended
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006265	DNA topological change	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0009922	fatty acid elongase activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002205	Topo_IIA_dom_A	726	1186
IPR031660	TOPRIM_C	596	723
IPR006171	TOPRIM_domain	482	580
IPR013506	Topo_IIA_bsu_dom2	296	451
IPR003594	HATPase_C	103	250

External Links

No external refs found!

Dde_g46169 (TOPII, ATTOPII)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation