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  5. Dde_g28139

Dde_g28139 (TBL4)


Aliases : TBL4

Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g28139
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT5G19160 TBL11 TRICHOME BIREFRINGENCE-LIKE 11 0.03 OrthoFinder output from all 47 species
Ala_g05795 TBL1 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01764 TBL7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g05620 TBL18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g31550.1 TBL13, LOC_Os07g31550 Protein trichome birefringence-like 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g05080.1 TBL10, LOC_Os11g05080 rhamnogalacturonan-I O-acetyltransferase (TBL) 0.01 OrthoFinder output from all 47 species
LOC_Os12g33194.1 TBL16, LOC_Os12g33194 Protein trichome birefringence-like 16 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Lfl_g01621 TBL14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09991 TBL12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035942_P001 ESK1, TBL29,... xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Zm00001e036215_P001 TBR, Zm00001e036215 Protein trichome birefringence OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e038414_P003 PMR5, TBL44,... Protein PMR5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 8 157
No external refs found!