Dde_g26159


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g26159

Target Alias Description ECC score Gene Family Method Actions
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g003540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17028 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27898 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16850 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01199.t1 OTP86, Aspi01Gene01199 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30517.t2 CRR22, Aspi01Gene30517 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66061.t3 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014887 No alias not classified & original description: CDS=1-2661 0.04 OrthoFinder output from all 47 species
Azfi_s0191.g056992 No alias not classified & original description: CDS=1-2262 0.04 OrthoFinder output from all 47 species
Cba_g72888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G046500.1 Ceric.23G046500 not classified & original description: pacid=50610423... 0.03 OrthoFinder output from all 47 species
Dac_g04271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11189 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15290 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020618 REME1 not classified & original description: CDS=24-1478 0.03 OrthoFinder output from all 47 species
Sam_g03326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g21106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033826_P001 Zm00001e033826 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Zm00001e036537_P001 Zm00001e036537 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e039305_P001 Zm00001e039305 RNA editing factor (MEF13) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 93 119
IPR002885 Pentatricopeptide_repeat 17 65
No external refs found!