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Aliases : MBD05, MBD5, ATMBD5
Description : methylation reader *(MBD5-6) & original description: none
Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dde_g20923 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g111775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037484 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: CDS=365-2911 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0158.g053875 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: CDS=259-3537 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G068700.1 | MBD05, MBD5,... | methylation reader *(MBD5-6) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G081800.1 | ATMBD6, MBD6,... | methylation reader *(MBD5-6) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g04554 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06705 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05822 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17409 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g09180 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g025970.3.1 | MBD13, Solyc03g025970 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12365 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001739 | Methyl_CpG_DNA-bd | 395 | 449 |
| No external refs found! |