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  5. Dde_g20918

Dde_g20918 (CRY3)


Aliases : CRY3

Description : cryptochrome-DASH photoreceptor *(CRYD) & original description: none


Gene families : OG0004694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g20918
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00168820 CRY3,... Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza... 0.03 OrthoFinder output from all 47 species
Ala_g09162 CRY3 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.05 OrthoFinder output from all 47 species
Als_g11197 CRY3 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.06 OrthoFinder output from all 47 species
Aob_g02124 CRY3 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene63393.t1 CRY3, Aspi01Gene63393 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63421.t1 CRY3, Aspi01Gene63421 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.70 CRY3 Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 OrthoFinder output from all 47 species
Len_g22876 CRY3 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.03 OrthoFinder output from all 47 species
MA_10436007g0010 CRY3 Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species
Msp_g39206 CRY3 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.03 OrthoFinder output from all 47 species
Pir_g20160 CRY3 cryptochrome-DASH photoreceptor *(CRYD) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e037720_P003 CRY3, Zm00001e037720 Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 388 548
IPR006050 DNA_photolyase_N 84 269
No external refs found!