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  5. Dde_g17973

Dde_g17973 (CP24, LHCB6)


Aliases : CP24, LHCB6

Description : component *(LHCb6) of LHC-II complex & original description: none


Gene families : OG0003880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17973
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268360 CP24, LHCB6,... Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
AT1G15820 CP24, LHCB6 light harvesting complex photosystem II subunit 6 0.07 OrthoFinder output from all 47 species
Adi_g050814 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Adi_g084972 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Aev_g42764 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46568 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g04130 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14893 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Als_g04793 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08113 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Aob_g08786 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16767 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01085 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13957 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38727.t1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0186.g056695 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original... 0.08 OrthoFinder output from all 47 species
Cba_g06222 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07812 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G051300.1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original... 0.18 OrthoFinder output from all 47 species
Ceric.26G015400.1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original... 0.06 OrthoFinder output from all 47 species
Dac_g26480 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g02505 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g30591 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05483 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029789001 CP24, LHCB6 Photosynthesis.photophosphorylation.photosystem... 0.12 OrthoFinder output from all 47 species
Gb_27633 CP24, LHCB6 component LHCb6 of LHC-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os04g38410.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.08 OrthoFinder output from all 47 species
Len_g14628 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Len_g18838 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Len_g37514 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37515 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Mp6g01650.1 CP24, LHCB6 component LHCb6 of LHC-II complex 0.16 OrthoFinder output from all 47 species
Msp_g01460 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g11766 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03418 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g21203 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10858 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g01878 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g05601 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g30781 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g54300 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14091 No alias component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Smo271833 CP24, LHCB6 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc01g105030.3.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.06 OrthoFinder output from all 47 species
Solyc01g105050.3.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.06 OrthoFinder output from all 47 species
Spa_g42268 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g42269 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g48848 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54507 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g54890 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05852 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21610 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e006561_P001 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.1 OrthoFinder output from all 47 species
Zm00001e041918_P001 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 78 254
No external refs found!