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  5. Dde_g17271

Dde_g17271


Description : sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking & original description: none


Gene families : OG0002081 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g17271
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Ala_g21332 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012710 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.04 OrthoFinder output from all 47 species
Cre10.g427700 No alias DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g29901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137324g0010 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Smo267628 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 453 550
IPR011545 DEAD/DEAH_box_helicase_dom 217 398
No external refs found!